bug fix: exports

v2.0
Steve Nyemba 10 months ago
parent a6b52719f9
commit 4a2c039c38

@ -143,6 +143,8 @@ def parse (claim_folder:str,plugin_folder:str = None,config_path:str = None):
# pass # pass
# else: # else:
# pass # pass
print ()
print (" PARSED ")
print ("...................... FINISHED .........................") print ("...................... FINISHED .........................")
# #
# #
@ -188,7 +190,6 @@ def publish (file_type:str,path:str):
_type = 'remits' _type = 'remits'
_x12 = '835' _x12 = '835'
if _type : if _type :
print ([f"Exporting {_type}"])
_store = {'source':os.sep.join([CONFIG_FOLDER,'config.json']),'target':path} _store = {'source':os.sep.join([CONFIG_FOLDER,'config.json']),'target':path}
for _key in _store : for _key in _store :
f = open(_store[_key]) f = open(_store[_key])
@ -200,6 +201,10 @@ def publish (file_type:str,path:str):
x12.publish.init(plugins=_plugins,x12=_x12,store=_store) x12.publish.init(plugins=_plugins,x12=_x12,store=_store)
else: else:
print ("Can not determine type, (837 or 835)") print ("Can not determine type, (837 or 835)")
print ()
print (" EXPORT ")
print ("...................... FINISHED .........................")
if __name__ == '__main__' : if __name__ == '__main__' :

@ -6,7 +6,7 @@ import time
import pandas as pd import pandas as pd
from multiprocessing import Process from multiprocessing import Process
import json import json
from healthcareio.logger import X12Logger
def build (**_args): def build (**_args):
""" """
This function will build SQL statements to create a table (perhaps not needed) This function will build SQL statements to create a table (perhaps not needed)
@ -111,25 +111,40 @@ def init(**_args):
_plugins = _args['plugins'] _plugins = _args['plugins']
_store = _args['store'] _store = _args['store']
_default = build(plugins=_plugins,x12=_file_type) _default = build(plugins=_plugins,x12=_file_type)
_logger = X12Logger(store = _store['source'])
_df = read(store = _store['source'],x12=_file_type) _df = read(store = _store['source'],x12=_file_type)
#
# @LOG :
if _logger :
_logger.log(module='init',action='export-init',data={'rows':_df.shape[0],'attributes':list(_df.columns)})
_pkey = util.getPrimaryKey(plugins = _plugins, x12=_file_type) _pkey = util.getPrimaryKey(plugins = _plugins, x12=_file_type)
SEGMENTS = 4 # arbitrary choice SEGMENTS = 4 # arbitrary choice
_indexes = np.array_split(np.arange(_df.shape[0]),SEGMENTS) _indexes = np.array_split(np.arange(_df.shape[0]),SEGMENTS)
jobs = [] jobs = []
_tables = {}
for _ii in _indexes : for _ii in _indexes :
try: try:
_data = format(rows= _df.iloc[_ii].to_dict(orient='records'),x12=_file_type,primary_key=_pkey) _data = format(rows= _df.iloc[_ii].to_dict(orient='records'),x12=_file_type,primary_key=_pkey)
_thread = Process(target=post,args=({'store':_store['target'],'data':_data,'default':_default,'x12':_file_type},)) _thread = Process(target=post,args=({'store':_store['target'],'data':_data,'default':_default,'x12':_file_type},))
_thread.start()
jobs.append(_thread) jobs.append(_thread)
_tables = list(_data.keys())
except Exception as e: except Exception as e:
# #
# Log: sigment, # Log: sigment,
print (e) print (e)
pass pass
#
# @LOG :
if _logger :
_logger.log(module='init',action='export-wait',data={'jobs':len(jobs),'tables':_tables})
if jobs : if jobs :
jobs[0].start() # jobs[0].start()
jobs[0].join() # jobs[0].join()
while jobs : while jobs :
jobs = [thread for thread in jobs if thread.is_alive()] jobs = [thread for thread in jobs if thread.is_alive()]
time.sleep(1) time.sleep(1)
@ -160,6 +175,7 @@ def post(_args):
_tablename = _prefix+_name _tablename = _prefix+_name
_store['table'] = _tablename if _name not in ['remits','claims'] else _name _store['table'] = _tablename if _name not in ['remits','claims'] else _name
_store['context']='write' _store['context']='write'
_store['lock'] = True
writer = transport.factory.instance(**_store) writer = transport.factory.instance(**_store)
if len(_data[_name]) == 0 and _name in _default and not writer.has(table=_tablename): if len(_data[_name]) == 0 and _name in _default and not writer.has(table=_tablename):
_rows = [_default[_name]] _rows = [_default[_name]]

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