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200 lines
6.9 KiB
Python
200 lines
6.9 KiB
Python
5 years ago
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"""
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(c) 2019 EDI-Parser 1.0
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Vanderbilt University Medical Center, Health Information Privacy Laboratory
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https://hiplab.mc.vanderbilt.edu/tools
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Authors:
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Khanhly Nguyen,
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Steve L. Nyemba<steve.l.nyemba@vanderbilt.edu>
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License:
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MIT, terms are available at https://opensource.org/licenses/MIT
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This parser was originally written by Khanhly Nguyen for her internship and is intended to parse x12 835,837 and others provided the appropriate configuration
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USAGE :
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- COMMAND LINE
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- EMBEDDED
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"""
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import os
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import sys
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def split(row,sep='*',prefix='HI'):
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"""
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This function is designed to split an x12 row and
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"""
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if row.startswith(prefix) is False:
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value = []
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for row_value in row.replace('~','').split(sep) :
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if '>' in row_value :
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if row_value.startswith('HC') or row_value.startswith('AD'):
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value += row_value.split('>')[:2]
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else:
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value += row_value.split('>')
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else :
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value.append(row_value)
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return [xchar.replace('\r','') for xchar in value] #row.replace('~','').split(sep)
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else:
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return [ [prefix]+ split(item,'>') for item in row.replace('~','').split(sep)[1:] ]
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def get_config(config,row):
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"""
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This function will return the meaningfull parts of the configuration for a given item
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"""
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_row = list(row) if type(row[0]) == str else list(row[0])
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_info = config[_row[0]] if _row[0] in config else {}
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key = None
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if '@ref' in _info:
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key = list(set(_row) & set(_info['@ref'].keys()))
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if key :
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key = key[0]
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return _info['@ref'][key]
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else:
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return {}
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if not _info and 'SIMILAR' in config:
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#
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# Let's look for the nearest key using the edit distance
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if _row[0] in config['SIMILAR'] :
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key = config['SIMILAR'][_row[0]]
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_info = config[key]
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return _info
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def format_date(value) :
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year = value[:4]
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month = value[4:6]
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day = value[6:]
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return "-".join([year,month,day])[:10] #{"year":year,"month":month,"day":day}
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def format_time(value):
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return ":".join([value[:2],value[2:] ])[:5]
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def format_proc(value):
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if ':' in value :
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return {"procedure_type":value.split(':')[0].strip(),"procedure_code":value.split(':')[1].strip()}
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else:
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return value
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5 years ago
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VERSION = x12_file[1].split('*')[-1].replace('~','')
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row = split(x12_file[3])
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_info = get_config(config,row)
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5 years ago
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else:
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